Useful toolsΒΆ
To use scriptcwl for creating CWL workflows, you need CWL CommandLineTools
.
There are some software packages that help with generating those.
- argparse2tool: Generate CWL
CommandLineTool
wrappers (and/or Galaxy tool descriptions) from Python programs that use argparse. Also supports the click argument parser - pypi2cwl: Automatically run argparse2cwl on any package in PyPi
- python-cwlgen: Generate CommandLineTool and DockerRequirement programmatically